HL_6FTG_015

3D structure

PDB id

6FTG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes

Experimental method

ELECTRON MICROSCOPY

Resolution

9.1 Å

Loop

Sequence

UCGCACGAAA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTG|1|u|U|1364
6FTG|1|u|C|1365
6FTG|1|u|G|1366
6FTG|1|u|C|1367
6FTG|1|u|A|1368
6FTG|1|u|C|1369
6FTG|1|u|G|1370
6FTG|1|u|A|1371
6FTG|1|u|A|1372
6FTG|1|u|A|1373

Current chains

Chain u

28S ribosomal RNA

Nearby chains

Chain C

Ribosomal protein L4

Chain L

eL13

Chain N

Ribosomal protein L15

Chain Y

Ribosomal protein L26

Chain w

5.8S ribosomal RNA; 5.8S rRNA