HL_6FTG_055

3D structure

PDB id

6FTG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes

Experimental method

ELECTRON MICROSCOPY

Resolution

9.1 Å

Loop

Sequence

GCGCGCC

Length

7 nucleotides

Bulged bases

6FTG|1|u|C|4144

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6FTG_055 not in the Motif Atlas

Geometric match to HL_8C3A_221

Geometric discrepancy: 0.35

The information below is about HL_8C3A_221

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48417.3

Basepair signature

cWW-F-F

Number of instances in this motif group

23

Unit IDs

6FTG|1|u|G|4139
6FTG|1|u|C|4140
6FTG|1|u|G|4141
6FTG|1|u|C|4142
6FTG|1|u|G|4143
6FTG|1|u|C|4144
6FTG|1|u|C|4145

Current chains

Chain u

28S ribosomal RNA

Nearby chains