HL_6FTG_070

3D structure

PDB id

6FTG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes

Experimental method

ELECTRON MICROSCOPY

Resolution

9.1 Å

Loop

Sequence

GGAGAGGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6FTG_070 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.1256

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

6FTG|1|u|G|4907
6FTG|1|u|G|4908
6FTG|1|u|A|4909
6FTG|1|u|G|4910
6FTG|1|u|A|4911
6FTG|1|u|G|4912
6FTG|1|u|G|4913
6FTG|1|u|C|4914

Current chains

Chain u

28S ribosomal RNA

Nearby chains

Chain B

uL3

Chain O

uL13