3D structure

PDB id
6FTG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
Experimental method
ELECTRON MICROSCOPY
Resolution
9.1 Å

Loop

Sequence
GUGGCCAUGGAAGUCGGAAUC
Length
21 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6FTG|1|u|G|1973
6FTG|1|u|U|1974
6FTG|1|u|G|1975
6FTG|1|u|G|1976
6FTG|1|u|C|1977
6FTG|1|u|C|1978
6FTG|1|u|A|1979
6FTG|1|u|U|1980
6FTG|1|u|G|1981
6FTG|1|u|G|1982
6FTG|1|u|A|1983
6FTG|1|u|A|1984
6FTG|1|u|G|1985
6FTG|1|u|U|1986
6FTG|1|u|C|1987
6FTG|1|u|G|1988
6FTG|1|u|G|1989
6FTG|1|u|A|1990
6FTG|1|u|A|1991
6FTG|1|u|U|1992
6FTG|1|u|C|1993

Current chains

Chain u
28S ribosomal RNA

Nearby chains

Chain I
Ribosomal protein L10 (Predicted)
Chain s
60S acidic ribosomal protein P0
Chain t
Ribosomal protein L12

Coloring options:

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