HL_6FTI_053
3D structure
- PDB id
- 6FTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- GUAACUAUGAC
- Length
- 11 nucleotides
- Bulged bases
- 6FTI|1|u|A|3760
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6FTI_053 not in the Motif Atlas
- Homologous match to HL_5TBW_049
- Geometric discrepancy: 0.1962
- The information below is about HL_5TBW_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84702.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6FTI|1|u|G|3757
6FTI|1|u|U|3758
6FTI|1|u|A|3759
6FTI|1|u|A|3760
6FTI|1|u|C|3761
6FTI|1|u|U|3762
6FTI|1|u|A|3763
6FTI|1|u|U|3764
6FTI|1|u|G|3765
6FTI|1|u|A|3766
6FTI|1|u|C|3767
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain q
- Transfer RNA; tRNA
Coloring options: