HL_6FTI_065
3D structure
- PDB id
- 6FTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- UUUGGGUUUUA
- Length
- 11 nucleotides
- Bulged bases
- 6FTI|1|u|U|4354
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6FTI_065 not in the Motif Atlas
- Geometric match to HL_4V83_139
- Geometric discrepancy: 0.3065
- The information below is about HL_4V83_139
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53597.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 31
Unit IDs
6FTI|1|u|U|4352
6FTI|1|u|U|4353
6FTI|1|u|U|4354
6FTI|1|u|G|4355
6FTI|1|u|G|4356
6FTI|1|u|G|4357
6FTI|1|u|U|4358
6FTI|1|u|U|4359
6FTI|1|u|U|4360
6FTI|1|u|U|4361
6FTI|1|u|A|4362
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain L
- eL13
- Chain a
- uL15
- Chain i
- 60S ribosomal protein L36
- Chain o
- eL42
Coloring options: