HL_6FTJ_060
3D structure
- PDB id
- 6FTJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UUCAGUACG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6FTJ_060 not in the Motif Atlas
- Homologous match to HL_8C3A_059
- Geometric discrepancy: 0.2054
- The information below is about HL_8C3A_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34636.1
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6FTJ|1|u|U|4301
6FTJ|1|u|U|4302
6FTJ|1|u|C|4303
6FTJ|1|u|A|4304
6FTJ|1|u|G|4305
6FTJ|1|u|U|4306
6FTJ|1|u|A|4307
6FTJ|1|u|C|4308
6FTJ|1|u|G|4309
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain Q
- uL14
- Chain T
- eL21
- Chain a
- uL15
- Chain o
- eL42
Coloring options: