HL_6FXC_014

3D structure

PDB id

6FXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

6.76 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

6FXC|1|AA|G|457

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6FXC_014 not in the Motif Atlas

Homologous match to HL_7RQB_014

Geometric discrepancy: 0.1013

The information below is about HL_7RQB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_96598.1

Basepair signature

cWW

Number of instances in this motif group

15

Unit IDs

6FXC|1|AA|G|456
6FXC|1|AA|G|457
6FXC|1|AA|A|458
6FXC|1|AA|C|459
6FXC|1|AA|C|460
6FXC|1|AA|A|461
6FXC|1|AA|U|462
6FXC|1|AA|C|463

Current chains

Chain AA

23S ribosomal RNA

Nearby chains