HL_6FXC_025

3D structure

PDB id

6FXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

6.76 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

6FXC|1|AA|U|872, 6FXC|1|AA|G|875

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6FXC_025 not in the Motif Atlas

Homologous match to HL_4WF9_025

Geometric discrepancy: 0.0727

The information below is about HL_4WF9_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55195.3

Basepair signature

cWW-F

Number of instances in this motif group

6

Unit IDs

6FXC|1|AA|U|871
6FXC|1|AA|U|872
6FXC|1|AA|U|873
6FXC|1|AA|A|874
6FXC|1|AA|G|875
6FXC|1|AA|G|876

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AJ

50S ribosomal protein L15