HL_6FXC_028
3D structure
- PDB id
- 6FXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.76 Å
Loop
- Sequence
- GAAACAGC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6FXC_028 not in the Motif Atlas
- Homologous match to HL_5J7L_160
- Geometric discrepancy: 0.091
- The information below is about HL_5J7L_160
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_42998.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
6FXC|1|AA|G|1022
6FXC|1|AA|A|1023
6FXC|1|AA|A|1024
6FXC|1|AA|A|1025
6FXC|1|AA|C|1026
6FXC|1|AA|A|1027
6FXC|1|AA|G|1028
6FXC|1|AA|C|1029
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AO
- 50S ribosomal protein L20
- Chain AP
- 50S ribosomal protein L21
- Chain AX
- 50S ribosomal protein L30
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