3D structure

PDB id
6FXC (explore in PDB, NAKB, or RNA 3D Hub)
Description
The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus
Experimental method
ELECTRON MICROSCOPY
Resolution
6.76 Å

Loop

Sequence
GGGCCGGUUAC
Length
11 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6FXC_127 not in the Motif Atlas
Geometric match to HL_2ZZM_002
Geometric discrepancy: 0.323
The information below is about HL_2ZZM_002
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_13963.3
Basepair signature
cWW-F-F
Number of instances in this motif group
4

Unit IDs

6FXC|1|BA|G|925
6FXC|1|BA|G|926
6FXC|1|BA|G|927
6FXC|1|BA|C|928
6FXC|1|BA|C|929
6FXC|1|BA|G|937
6FXC|1|BA|G|938
6FXC|1|BA|U|939
6FXC|1|BA|U|940
6FXC|1|BA|A|941
6FXC|1|BA|C|942

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.4911 s