HL_6FXC_127
3D structure
- PDB id
- 6FXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.76 Å
Loop
- Sequence
- GGGCCGGUUAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6FXC_127 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.323
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_13963.3
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
6FXC|1|BA|G|925
6FXC|1|BA|G|926
6FXC|1|BA|G|927
6FXC|1|BA|C|928
6FXC|1|BA|C|929
6FXC|1|BA|G|937
6FXC|1|BA|G|938
6FXC|1|BA|U|939
6FXC|1|BA|U|940
6FXC|1|BA|A|941
6FXC|1|BA|C|942
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: