HL_6FXC_207

3D structure

PDB id

6FXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

6.76 Å

Loop

Sequence

CUUUGAAACGUGAGCGCUAGCUUACGUGGAG

Length

31 nucleotides

Bulged bases

6FXC|1|AA|U|2158, 6FXC|1|AA|U|2159, 6FXC|1|AA|C|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FXC|1|AA|C|2156
6FXC|1|AA|U|2157
6FXC|1|AA|U|2158
6FXC|1|AA|U|2159
6FXC|1|AA|G|2160
6FXC|1|AA|A|2161
6FXC|1|AA|A|2162
6FXC|1|AA|A|2163
6FXC|1|AA|C|2164
6FXC|1|AA|G|2165
6FXC|1|AA|U|2166
6FXC|1|AA|G|2167
6FXC|1|AA|A|2168
6FXC|1|AA|G|2169
6FXC|1|AA|C|2170
6FXC|1|AA|G|2171
6FXC|1|AA|C|2172
6FXC|1|AA|U|2173
6FXC|1|AA|A|2174
6FXC|1|AA|G|2175
6FXC|1|AA|C|2176
6FXC|1|AA|U|2177
6FXC|1|AA|U|2178
6FXC|1|AA|A|2179
6FXC|1|AA|C|2180
6FXC|1|AA|G|2181
6FXC|1|AA|U|2182
6FXC|1|AA|G|2183
6FXC|1|AA|G|2184
6FXC|1|AA|A|2185
6FXC|1|AA|G|2186

Current chains

Chain AA

23S ribosomal RNA

Nearby chains