HL_6FXC_218
3D structure
- PDB id
- 6FXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.76 Å
Loop
- Sequence
- CGAAGCAACGCG
- Length
- 12 nucleotides
- Bulged bases
- 6FXC|1|Ba|G|980
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6FXC_218 not in the Motif Atlas
- Geometric match to HL_1KH6_003
- Geometric discrepancy: 0.2148
- The information below is about HL_1KH6_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
6FXC|1|Ba|C|971
6FXC|1|Ba|G|972
6FXC|1|Ba|A|973
6FXC|1|Ba|A|974
6FXC|1|Ba|G|975
6FXC|1|Ba|C|976
6FXC|1|Ba|A|977
6FXC|1|Ba|A|978
6FXC|1|Ba|C|979
6FXC|1|Ba|G|980
6FXC|1|Ba|C|981
6FXC|1|Ba|G|982
Current chains
- Chain Ba
- 16S ribosomal RNA
Nearby chains
- Chain Bi
- 30S ribosomal protein S9
- Chain Bj
- 30S ribosomal protein S10
- Chain Bn
- 30S ribosomal protein S14 type Z
- Chain Bv
- Ribosome hibernation promotion factor
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