HL_6GB2_025

3D structure

PDB id

6GB2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 39S ribosomal subunit.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AGCAUUACUAGUAUU

Length

15 nucleotides

Bulged bases

6GB2|1|BA|A|853, 6GB2|1|BA|U|854, 6GB2|1|BA|U|855, 6GB2|1|BA|A|859, 6GB2|1|BA|U|863

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GB2|1|BA|A|850
6GB2|1|BA|G|851
6GB2|1|BA|C|852
6GB2|1|BA|A|853
6GB2|1|BA|U|854
6GB2|1|BA|U|855
6GB2|1|BA|A|856
6GB2|1|BA|C|857
6GB2|1|BA|U|858
6GB2|1|BA|A|859
6GB2|1|BA|G|860
6GB2|1|BA|U|861
6GB2|1|BA|A|862
6GB2|1|BA|U|863
6GB2|1|BA|U|864

Current chains

Chain BA

16S ribosomal RNA, mitochondrial

Nearby chains

Chain BD

Mitochondrial ribosomal protein L2

Chain Ba

Mitochondrial ribosomal protein L37