HL_6GC0_070

3D structure

PDB id

6GC0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCAAGGGGGUCAUCCCGACUUACCAACC

Length

28 nucleotides

Bulged bases

6GC0|1|A|U|887, 6GC0|1|A|C|890, 6GC0|1|A|A|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GC0|1|A|G|875
6GC0|1|A|C|876
6GC0|1|A|A|877
6GC0|1|A|A|878
6GC0|1|A|G|879
6GC0|1|A|G|880
6GC0|1|A|G|881
6GC0|1|A|G|882
6GC0|1|A|G|883
6GC0|1|A|U|884
6GC0|1|A|C|885
6GC0|1|A|A|886
6GC0|1|A|U|887
6GC0|1|A|C|888
6GC0|1|A|C|889
6GC0|1|A|C|890
6GC0|1|A|G|891
6GC0|1|A|A|892
6GC0|1|A|C|893
6GC0|1|A|U|894
6GC0|1|A|U|895
6GC0|1|A|A|896
6GC0|1|A|C|897
6GC0|1|A|C|898
6GC0|1|A|A|899
6GC0|1|A|A|900
6GC0|1|A|C|901
6GC0|1|A|C|902

Current chains

Chain A

23S ribosomal RNA

Nearby chains