HL_6GC0_072

3D structure

PDB id

6GC0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGUGAAAAGCC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GC0|1|A|G|1280
6GC0|1|A|G|1281
6GC0|1|A|U|1282
6GC0|1|A|G|1283
6GC0|1|A|A|1284
6GC0|1|A|A|1285
6GC0|1|A|A|1286
6GC0|1|A|A|1287
6GC0|1|A|G|1288
6GC0|1|A|C|1289
6GC0|1|A|C|1290

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain N

50S ribosomal protein L17

Chain S

50S ribosomal protein L22