HL_6GC0_077

3D structure

PDB id

6GC0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UCCUAAAGAGUAACGGA

Length

17 nucleotides

Bulged bases

6GC0|1|A|A|2268, 6GC0|1|A|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GC0|1|A|U|2262
6GC0|1|A|C|2263
6GC0|1|A|C|2264
6GC0|1|A|U|2265
6GC0|1|A|A|2266
6GC0|1|A|A|2267
6GC0|1|A|A|2268
6GC0|1|A|G|2269
6GC0|1|A|A|2270
6GC0|1|A|G|2271
6GC0|1|A|U|2272
6GC0|1|A|A|2273
6GC0|1|A|A|2274
6GC0|1|A|C|2275
6GC0|1|A|G|2276
6GC0|1|A|G|2277
6GC0|1|A|A|2278

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain W

50S ribosomal protein L27