HL_6GC7_052
3D structure
- PDB id
- 6GC7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S ribosomal subunit assembly intermediate state 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- GUGAAAGGC
- Length
- 9 nucleotides
- Bulged bases
- 6GC7|1|A|A|781, 6GC7|1|A|G|784
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GC7_052 not in the Motif Atlas
- Geometric match to HL_6CF2_001
- Geometric discrepancy: 0.3447
- The information below is about HL_6CF2_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87553.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
6GC7|1|A|G|778
6GC7|1|A|U|779
6GC7|1|A|G|780
6GC7|1|A|A|781
6GC7|1|A|A|782
6GC7|1|A|A|783
6GC7|1|A|G|784
6GC7|1|A|G|785
6GC7|1|A|C|786
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: