HL_6GC8_030
3D structure
- PDB id
- 6GC8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S ribosomal subunit assembly intermediate - 50S rec*
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GACGCUUAUGCGUU
- Length
- 14 nucleotides
- Bulged bases
- 6GC8|1|A|U|1174, 6GC8|1|A|A|1175
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GC8_030 not in the Motif Atlas
- Geometric match to HL_5TBW_226
- Geometric discrepancy: 0.3805
- The information below is about HL_5TBW_226
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_59342.2
- Basepair signature
- cWW-F-F-F-F-cWW-F-F
- Number of instances in this motif group
- 5
Unit IDs
6GC8|1|A|G|1168
6GC8|1|A|A|1169
6GC8|1|A|C|1170
6GC8|1|A|G|1171
6GC8|1|A|C|1172
6GC8|1|A|U|1173
6GC8|1|A|U|1174
6GC8|1|A|A|1175
6GC8|1|A|U|1176
6GC8|1|A|G|1177
6GC8|1|A|C|1178
6GC8|1|A|G|1179
6GC8|1|A|U|1180
6GC8|1|A|U|1181
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain L
- 50S ribosomal protein L15
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