HL_6GSJ_142

3D structure

PDB id

6GSJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

2.96 Å

Loop

Sequence

UUGGGAAG

Length

8 nucleotides

Bulged bases

6GSJ|1|1H|A|311

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GSJ_142 not in the Motif Atlas

Homologous match to HL_7RQB_010

Geometric discrepancy: 0.059

The information below is about HL_7RQB_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41998.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

69

Unit IDs

6GSJ|1|1H|U|305
6GSJ|1|1H|U|306
6GSJ|1|1H|G|307
6GSJ|1|1H|G|308
6GSJ|1|1H|G|309
6GSJ|1|1H|A|310
6GSJ|1|1H|A|311
6GSJ|1|1H|G|312

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain G8

50S ribosomal protein L24