3D structure

PDB id
6GSK (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-site
Experimental method
X-RAY DIFFRACTION
Resolution
3.36 Å

Loop

Sequence
CGUUGAG
Length
7 nucleotides
Bulged bases
6GSK|1|14|G|615
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6GSK_050 not in the Motif Atlas
Homologous match to HL_7RQB_019
Geometric discrepancy: 0.117
The information below is about HL_7RQB_019
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_32369.1
Basepair signature
cWW-tSW-F
Number of instances in this motif group
6

Unit IDs

6GSK|1|14|C|611
6GSK|1|14|G|612
6GSK|1|14|U|613
6GSK|1|14|U|614
6GSK|1|14|G|615
6GSK|1|14|A|616
6GSK|1|14|G|617

Current chains

Chain 14
23S ribosomal RNA

Nearby chains

Chain 39
50S ribosomal protein L4

Coloring options:


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