HL_6GSL_011

3D structure

PDB id

6GSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.16 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

6GSL|1|13|U|421

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GSL_011 not in the Motif Atlas

Homologous match to HL_4LFB_011

Geometric discrepancy: 0.1142

The information below is about HL_4LFB_011

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

6GSL|1|13|C|419
6GSL|1|13|U|420
6GSL|1|13|U|421
6GSL|1|13|C|422
6GSL|1|13|G|423
6GSL|1|13|G|424

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 2E

30S ribosomal protein S3

Chain 3E

30S ribosomal protein S4