HL_6GSL_089
3D structure
- PDB id
- 6GSL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.16 Å
Loop
- Sequence
- CCUGCAAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GSL_089 not in the Motif Atlas
- Homologous match to HL_7RQB_057
- Geometric discrepancy: 0.0946
- The information below is about HL_7RQB_057
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53619.1
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 11
Unit IDs
6GSL|1|14|C|2355
6GSL|1|14|C|2356
6GSL|1|14|U|2357
6GSL|1|14|G|2358
6GSL|1|14|C|2359
6GSL|1|14|A|2360
6GSL|1|14|A|2361
6GSL|1|14|G|2362
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain 35
- 50S ribosomal protein L15
- Chain E5
- 50S ribosomal protein L27
- Chain M5
- 50S ribosomal protein L35
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