HL_6GSL_221
3D structure
- PDB id
- 6GSL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.16 Å
Loop
- Sequence
- CGGCUACGAACCG
- Length
- 13 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06285.3
- Basepair signature
- cWW-cWW-F-F-tSH-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
6GSL|1|3L|C|30
6GSL|1|3L|G|31
6GSL|1|3L|G|32
6GSL|1|3L|C|33
6GSL|1|3L|U|34
6GSL|1|3L|A|35
6GSL|1|3L|C|36
6GSL|1|3L|G|37
6GSL|1|3L|A|38
6GSL|1|3L|A|39
6GSL|1|3L|C|40
6GSL|1|3L|C|41
6GSL|1|3L|G|42
Current chains
- Chain 3L
- tRNAArg
Nearby chains
- Chain 1G
- Small subunit ribosomal RNA; SSU rRNA
- Chain 2A
- 30S ribosomal protein S11
- Chain 2L
- Transfer RNA; tRNA
- Chain 4L
- mRNA
- Chain 62
- 30S ribosomal protein S7
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