3D structure

PDB id
6GSL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site
Experimental method
X-RAY DIFFRACTION
Resolution
3.16 Å

Loop

Sequence
CGGCUACGAACCG
Length
13 nucleotides
Bulged bases (A, C, G, U)
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_06285.3
Basepair signature
cWW-cWW-F-F-tSH-F-F-F-F-F
Number of instances in this motif group
6

Unit IDs

6GSL|1|3L|C|30
6GSL|1|3L|G|31
6GSL|1|3L|G|32
6GSL|1|3L|C|33
6GSL|1|3L|U|34
6GSL|1|3L|A|35
6GSL|1|3L|C|36
6GSL|1|3L|G|37
6GSL|1|3L|A|38
6GSL|1|3L|A|39
6GSL|1|3L|C|40
6GSL|1|3L|C|41
6GSL|1|3L|G|42

Current chains

Chain 3L
tRNAArg

Nearby chains

Chain 1G
Small subunit ribosomal RNA; SSU rRNA
Chain 2A
30S ribosomal protein S11
Chain 2L
Transfer RNA; tRNA
Chain 4L
mRNA
Chain 62
30S ribosomal protein S7

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