#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 8 9 10 11 12 131-132-123-113-124-104-115-85-96-8
1 HL_5J7L_0225J7L0.75341 AA SSU rRNAU1008U1009U1010C1011A1012G1013G1015A1016U1017G1018A1019G1020A1021cWWncWWntSHncWWncWWntSH
2 HL_4WT8_1364WT80.48770 C3 tRNAG29G30A31U32U33G34A35A36A37A38U39C40C41cWWncWWntSWntSHntSH
3 HL_6GSL_2216GSL0.47150 3L tRNAC30G31G32C33U34A35C36G37A38A39C40C41G42cWWncWWncWWntWH
4 HL_8C3A_2058C3A0.29630 CM SSU rRNAA518A519U520G521U522A523A524A525U526A527C528C529U530cWWncWWntSHtSHtSH
5 HL_4V88_1994V880.28200 A6 SSU rRNAA520A521U522G523U524A525A526A527U528A529C530C531U532cWWncWWntSHncSWtSHntSH
6 HL_4WFL_0014WFL0.00000 A LSRP RNAG19A20G21G22U23A24G25C26G27G28U29G30C31cWWcWWtSHntSH

3D structures

Complete motif including flanking bases
SequenceCounts
AAUGUAAAUACCU2
UUUCAGAGAUGAGA1
GGAUUGAAAAUCC1
CGGCUACGAACCG1
GAGGUAGCGGUGC1
Non-Watson-Crick part of the motif
SequenceCounts
AUGUAAAUACC2
UUCAGAGAUGAG1
GAUUGAAAAUC1
GGCUACGAACC1
AGGUAGCGGUG1

Release history

Release3.843.853.863.87
Date2024-05-222024-06-192024-07-172024-08-14
StatusUpdated, 1 parentExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
Basepair signature
cWW-cWW-F-F-tSH-F-F-F-F-F
Heat map statistics
Min 0.12 | Avg 0.42 | Max 0.77
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