HL_6GXN_023

3D structure

PDB id

6GXN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

6GXN|1|A|U|827, 6GXN|1|A|G|830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GXN_023 not in the Motif Atlas

Homologous match to HL_7A0S_024

Geometric discrepancy: 0.1326

The information below is about HL_7A0S_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27530.1

Basepair signature

cWW-F-F

Number of instances in this motif group

10

Unit IDs

6GXN|1|A|U|826
6GXN|1|A|U|827
6GXN|1|A|U|828
6GXN|1|A|A|829
6GXN|1|A|G|830
6GXN|1|A|G|831

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L15