HL_6GXO_004
3D structure
- PDB id
- 6GXO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UUUCGA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GXO_004 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.1995
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6GXO|1|A|U|137
6GXO|1|A|U|138
6GXO|1|A|U|139
6GXO|1|A|C|140
6GXO|1|A|G|141
6GXO|1|A|A|142
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain T
- 50S ribosomal protein L23
Coloring options: