HL_6GZ3_076
3D structure
- PDB id
- 6GZ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CACUUG
- Length
- 6 nucleotides
- Bulged bases
- 6GZ3|1|A3|U|110, 6GZ3|1|A3|U|111
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GZ3_076 not in the Motif Atlas
- Homologous match to HL_5TBW_075
- Geometric discrepancy: 0.5984
- The information below is about HL_5TBW_075
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_22523.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
6GZ3|1|A3|C|107
6GZ3|1|A3|A|108
6GZ3|1|A3|C|109
6GZ3|1|A3|U|110
6GZ3|1|A3|U|111
6GZ3|1|A3|G|112
Current chains
- Chain A3
- 5.8S ribosomal RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain AX
- ribosomal protein uL23
- Chain Aj
- Ribosomal protein L37
- Chain Al
- ribosomal protein eL39
Coloring options: