HL_6GZ4_002
3D structure
- PDB id
- 6GZ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UAACCA
- Length
- 6 nucleotides
- Bulged bases
- 6GZ4|1|A2|C|72
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GZ4_002 not in the Motif Atlas
- Homologous match to HL_8C3A_002
- Geometric discrepancy: 0.2594
- The information below is about HL_8C3A_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_22523.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
6GZ4|1|A2|U|68
6GZ4|1|A2|A|69
6GZ4|1|A2|A|70
6GZ4|1|A2|C|71
6GZ4|1|A2|C|72
6GZ4|1|A2|A|73
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AL
- ribosomal protein eL13
- Chain AN
- ribosomal protein eL15
- Chain Aa
- ribosomal protein uL15
- Chain Ai
- ribosomal protein eL36
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