HL_6GZ4_086

3D structure

PDB id

6GZ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ4|1|B1|G|377
6GZ4|1|B1|U|378
6GZ4|1|B1|C|379
6GZ4|1|B1|G|380
6GZ4|1|B1|C|381
6GZ4|1|B1|C|382
6GZ4|1|B1|G|383
6GZ4|1|B1|U|384
6GZ4|1|B1|G|385
6GZ4|1|B1|C|386
6GZ4|1|B1|C|387

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain BI

ribosomal protein eS8

Chain BL

ribosomal protein uS17