HL_6GZ4_092
3D structure
- PDB id
- 6GZ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- ACUUUAAAUCCUU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GZ4_092 not in the Motif Atlas
- Homologous match to HL_4V88_199
- Geometric discrepancy: 0.2351
- The information below is about HL_4V88_199
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_05304.1
- Basepair signature
- cWW-cWW-F-F-tSH-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
6GZ4|1|B1|A|569
6GZ4|1|B1|C|570
6GZ4|1|B1|U|571
6GZ4|1|B1|U|572
6GZ4|1|B1|U|573
6GZ4|1|B1|A|574
6GZ4|1|B1|A|575
6GZ4|1|B1|A|576
6GZ4|1|B1|U|577
6GZ4|1|B1|C|578
6GZ4|1|B1|C|579
6GZ4|1|B1|U|580
6GZ4|1|B1|U|581
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BJ
- ribosomal protein uS4
- Chain BY
- ribosomal protein eS24
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