HL_6GZQ_013
3D structure
- PDB id
- 6GZQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- GGUUCGUGGAGCC
- Length
- 13 nucleotides
- Bulged bases
- 6GZQ|1|A1|G|414
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GZQ_013 not in the Motif Atlas
- Homologous match to HL_4WF9_013
- Geometric discrepancy: 0.383
- The information below is about HL_4WF9_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69139.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
6GZQ|1|A1|G|409
6GZQ|1|A1|G|410
6GZQ|1|A1|U|411
6GZQ|1|A1|U|412
6GZQ|1|A1|C|413
6GZQ|1|A1|G|414
6GZQ|1|A1|U|415
6GZQ|1|A1|G|416
6GZQ|1|A1|G|417
6GZQ|1|A1|A|418
6GZQ|1|A1|G|419
6GZQ|1|A1|C|420
6GZQ|1|A1|C|421
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain K1
- 50S ribosomal protein L15
- Chain W1
- 50S ribosomal protein L28
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