HL_6GZQ_024

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

UGAAAAG

Length

7 nucleotides

Bulged bases

6GZQ|1|A1|A|830, 6GZQ|1|A1|A|833

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GZQ_024 not in the Motif Atlas

Homologous match to HL_7A0S_023

Geometric discrepancy: 0.1217

The information below is about HL_7A0S_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56241.3

Basepair signature

cWW-F-F-F

Number of instances in this motif group

19

Unit IDs

6GZQ|1|A1|U|828
6GZQ|1|A1|G|829
6GZQ|1|A1|A|830
6GZQ|1|A1|A|831
6GZQ|1|A1|A|832
6GZQ|1|A1|A|833
6GZQ|1|A1|G|834

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain C1

50S ribosomal protein L2