HL_6GZQ_043

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

UGAUGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GZQ_043 not in the Motif Atlas

Homologous match to HL_7RQB_043

Geometric discrepancy: 0.4717

The information below is about HL_7RQB_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_43656.2

Basepair signature

cWW-tSH

Number of instances in this motif group

8

Unit IDs

6GZQ|1|A1|U|1767
6GZQ|1|A1|G|1768
6GZQ|1|A1|A|1769
6GZQ|1|A1|U|1770
6GZQ|1|A1|G|1771
6GZQ|1|A1|A|1772
6GZQ|1|A1|G|1773

Current chains

Chain A1

23S ribosomal RNA

Nearby chains