HL_6GZQ_048
3D structure
- PDB id
- 6GZQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- 6GZQ|1|A1|A|1937
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GZQ_048 not in the Motif Atlas
- Geometric match to HL_5TBW_049
- Geometric discrepancy: 0.1897
- The information below is about HL_5TBW_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84702.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6GZQ|1|A1|G|1934
6GZQ|1|A1|U|1935
6GZQ|1|A1|A|1936
6GZQ|1|A1|A|1937
6GZQ|1|A1|C|1938
6GZQ|1|A1|U|1939
6GZQ|1|A1|A|1940
6GZQ|1|A1|U|1941
6GZQ|1|A1|A|1942
6GZQ|1|A1|A|1943
6GZQ|1|A1|C|1944
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain A2
- Small subunit ribosomal RNA; SSU rRNA
- Chain V2
- Ribosome hibernation promoting factor
Coloring options: