HL_6GZQ_061

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

UGAAGAAG

Length

8 nucleotides

Bulged bases

6GZQ|1|A1|G|2543

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GZQ_061 not in the Motif Atlas

Homologous match to HL_7RQB_061

Geometric discrepancy: 0.152

The information below is about HL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91104.1

Basepair signature

cWW-F

Number of instances in this motif group

12

Unit IDs

6GZQ|1|A1|U|2542
6GZQ|1|A1|G|2543
6GZQ|1|A1|A|2544
6GZQ|1|A1|A|2545
6GZQ|1|A1|G|2546
6GZQ|1|A1|A|2547
6GZQ|1|A1|A|2548
6GZQ|1|A1|G|2549

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain G1

50S ribosomal protein L6

Chain e1

50S ribosomal protein L36