HL_6GZQ_072

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GZQ_072 not in the Motif Atlas

Homologous match to HL_5J7L_003

Geometric discrepancy: 0.161

The information below is about HL_5J7L_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.3

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

299

Unit IDs

6GZQ|1|A2|G|152
6GZQ|1|A2|G|153
6GZQ|1|A2|A|154
6GZQ|1|A2|A|155
6GZQ|1|A2|A|156
6GZQ|1|A2|C|157

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain T2

30S ribosomal protein S20