HL_6GZQ_084
3D structure
- PDB id
- 6GZQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GZQ_084 not in the Motif Atlas
- Homologous match to HL_4LFB_015
- Geometric discrepancy: 0.2188
- The information below is about HL_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
6GZQ|1|A2|C|672
6GZQ|1|A2|G|673
6GZQ|1|A2|G|674
6GZQ|1|A2|U|675
6GZQ|1|A2|G|676
6GZQ|1|A2|A|677
6GZQ|1|A2|A|678
6GZQ|1|A2|A|679
6GZQ|1|A2|U|680
6GZQ|1|A2|G|681
Current chains
- Chain A2
- 16S ribosomal RNA
Nearby chains
- Chain G2
- 30S ribosomal protein S7
- Chain K2
- 30S ribosomal protein S11
- Chain V2
- Ribosome hibernation promoting factor
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