HL_6GZQ_097
3D structure
- PDB id
- 6GZQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- GGUCUGCAACCCGACC
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GZQ_097 not in the Motif Atlas
- Geometric match to HL_5TBW_226
- Geometric discrepancy: 0.3843
- The information below is about HL_5TBW_226
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_59342.2
- Basepair signature
- cWW-F-F-F-F-cWW-F-F
- Number of instances in this motif group
- 5
Unit IDs
6GZQ|1|A2|G|1292
6GZQ|1|A2|G|1293
6GZQ|1|A2|U|1294
6GZQ|1|A2|C|1295
6GZQ|1|A2|U|1296
6GZQ|1|A2|G|1297
6GZQ|1|A2|C|1298
6GZQ|1|A2|A|1299
6GZQ|1|A2|A|1300
6GZQ|1|A2|C|1301
6GZQ|1|A2|C|1302
6GZQ|1|A2|C|1303
6GZQ|1|A2|G|1304
6GZQ|1|A2|A|1305
6GZQ|1|A2|C|1306
6GZQ|1|A2|C|1307
Current chains
- Chain A2
- 16S ribosomal RNA
Nearby chains
- Chain M2
- 30S ribosomal protein S13
- Chain N2
- 30S ribosomal protein S14 type Z
- Chain S2
- 30S ribosomal protein S19
- Chain U2
- 30S ribosomal protein Thx
- Chain Z1
- 50S ribosomal protein L31
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