HL_6GZQ_099

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

6GZQ|1|A2|A|1431

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GZQ_099 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.3083

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

6GZQ|1|A2|C|1429
6GZQ|1|A2|U|1430
6GZQ|1|A2|A|1431
6GZQ|1|A2|C|1432
6GZQ|1|A2|G|1433
6GZQ|1|A2|G|1434

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain T2

30S ribosomal protein S20