HL_6GZQ_114
3D structure
- PDB id
- 6GZQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- UUCCCAUUCCGAACA
- Length
- 15 nucleotides
- Bulged bases
- 6GZQ|1|B1|U|43
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GZQ_114 not in the Motif Atlas
- Homologous match to HL_8C3A_228
- Geometric discrepancy: 0.2037
- The information below is about HL_8C3A_228
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50688.1
- Basepair signature
- cWW-cWS-F-tSW-F-tSH-tSH-cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
6GZQ|1|B1|U|36
6GZQ|1|B1|U|37
6GZQ|1|B1|C|38
6GZQ|1|B1|C|39
6GZQ|1|B1|C|40
6GZQ|1|B1|A|41
6GZQ|1|B1|U|42
6GZQ|1|B1|U|43
6GZQ|1|B1|C|44
6GZQ|1|B1|C|45
6GZQ|1|B1|G|46
6GZQ|1|B1|A|47
6GZQ|1|B1|A|48
6GZQ|1|B1|C|49
6GZQ|1|B1|A|50
Current chains
- Chain B1
- 5S ribosomal RNA
Nearby chains
- Chain A1
- Large subunit ribosomal RNA; LSU rRNA
- Chain F1
- 50S ribosomal protein L5
- Chain N1
- 50S ribosomal protein L18
- Chain Z1
- 50S ribosomal protein L31
Coloring options: