HL_6GZX_005

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CGCUUUUUGCG

Length

11 nucleotides

Bulged bases

6GZX|1|A1|U|158

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A1|C|153
6GZX|1|A1|G|154
6GZX|1|A1|C|155
6GZX|1|A1|U|156
6GZX|1|A1|U|157
6GZX|1|A1|U|158
6GZX|1|A1|U|159
6GZX|1|A1|U|160
6GZX|1|A1|G|161
6GZX|1|A1|C|162
6GZX|1|A1|G|163

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain W1

50S ribosomal protein L28