HL_6GZX_018

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GCUUAAGCCGUUGAGGCGGAGGC

Length

23 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A1|G|629
6GZX|1|A1|C|630
6GZX|1|A1|U|631
6GZX|1|A1|U|632
6GZX|1|A1|A|633
6GZX|1|A1|A|634
6GZX|1|A1|G|635
6GZX|1|A1|C|636
6GZX|1|A1|C|637
6GZX|1|A1|G|638
6GZX|1|A1|U|639
6GZX|1|A1|U|640
6GZX|1|A1|G|641
6GZX|1|A1|A|642
6GZX|1|A1|G|643
6GZX|1|A1|G|644
6GZX|1|A1|C|645
6GZX|1|A1|G|646
6GZX|1|A1|G|647
6GZX|1|A1|A|648
6GZX|1|A1|G|649
6GZX|1|A1|G|650
6GZX|1|A1|C|651

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain E1

50S ribosomal protein L4

Chain K1

50S ribosomal protein L15

Chain d1

50S ribosomal protein L35