HL_6GZX_026
3D structure
- PDB id
- 6GZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (ice)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.57 Å
Loop
- Sequence
- CAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAGUGCGUAAUAGCUCACUG
- Length
- 54 nucleotides
- Bulged bases
- 6GZX|1|A1|U|1106, 6GZX|1|A1|G|1110, 6GZX|1|A1|G|1111, 6GZX|1|A1|C|1112, 6GZX|1|A1|U|1113, 6GZX|1|A1|U|1114, 6GZX|1|A1|G|1116, 6GZX|1|A1|A|1118, 6GZX|1|A1|C|1123, 6GZX|1|A1|C|1124, 6GZX|1|A1|A|1125, 6GZX|1|A1|U|1126, 6GZX|1|A1|C|1150
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZX|1|A1|C|1101
6GZX|1|A1|A|1102
6GZX|1|A1|G|1103
6GZX|1|A1|G|1104
6GZX|1|A1|A|1105
6GZX|1|A1|U|1106
6GZX|1|A1|G|1107
6GZX|1|A1|U|1108
6GZX|1|A1|U|1109
6GZX|1|A1|G|1110
6GZX|1|A1|G|1111
6GZX|1|A1|C|1112
6GZX|1|A1|U|1113
6GZX|1|A1|U|1114
6GZX|1|A1|A|1115
6GZX|1|A1|G|1116
6GZX|1|A1|A|1117
6GZX|1|A1|A|1118
6GZX|1|A1|G|1119
6GZX|1|A1|C|1120
6GZX|1|A1|A|1121
6GZX|1|A1|G|1122
6GZX|1|A1|C|1123
6GZX|1|A1|C|1124
6GZX|1|A1|A|1125
6GZX|1|A1|U|1126
6GZX|1|A1|C|1127
6GZX|1|A1|A|1128
6GZX|1|A1|U|1129
6GZX|1|A1|U|1130
6GZX|1|A1|U|1131
6GZX|1|A1|A|1132
6GZX|1|A1|A|1133
6GZX|1|A1|A|1134
6GZX|1|A1|G|1135
6GZX|1|A1|A|1136
6GZX|1|A1|G|1137
6GZX|1|A1|U|1138
6GZX|1|A1|G|1139
6GZX|1|A1|C|1140
6GZX|1|A1|G|1141
6GZX|1|A1|U|1142
6GZX|1|A1|A|1143
6GZX|1|A1|A|1144
6GZX|1|A1|U|1145
6GZX|1|A1|A|1146
6GZX|1|A1|G|1147
6GZX|1|A1|C|1148
6GZX|1|A1|U|1149
6GZX|1|A1|C|1150
6GZX|1|A1|A|1151
6GZX|1|A1|C|1152
6GZX|1|A1|U|1153
6GZX|1|A1|G|1154
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain G1
- 50S ribosomal protein L6
- Chain e1
- 50S ribosomal protein L36
Coloring options: