HL_6GZX_029

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GGGUGAGAAUCCC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A1|G|1327
6GZX|1|A1|G|1328
6GZX|1|A1|G|1329
6GZX|1|A1|U|1330
6GZX|1|A1|G|1331
6GZX|1|A1|A|1332
6GZX|1|A1|G|1333
6GZX|1|A1|A|1334
6GZX|1|A1|A|1335
6GZX|1|A1|U|1336
6GZX|1|A1|C|1337
6GZX|1|A1|C|1338
6GZX|1|A1|C|1339

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain M1

50S ribosomal protein L17

Chain R1

50S ribosomal protein L22

Chain a1

50S ribosomal protein L32