HL_6GZX_038

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CGUAACUUCGGGAGAAG

Length

17 nucleotides

Bulged bases

6GZX|1|A1|U|1742, 6GZX|1|A1|G|1748

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A1|C|1735
6GZX|1|A1|G|1736
6GZX|1|A1|U|1737
6GZX|1|A1|A|1738
6GZX|1|A1|A|1739
6GZX|1|A1|C|1740
6GZX|1|A1|U|1741
6GZX|1|A1|U|1742
6GZX|1|A1|C|1743
6GZX|1|A1|G|1744
6GZX|1|A1|G|1745
6GZX|1|A1|G|1746
6GZX|1|A1|A|1747
6GZX|1|A1|G|1748
6GZX|1|A1|A|1749
6GZX|1|A1|A|1750
6GZX|1|A1|G|1751

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain A3

Small subunit ribosomal RNA; SSU rRNA

Chain C1

50S ribosomal protein L2