HL_6GZX_042

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

UCAAGGGGAGGGGUGCAAGCCCCGAACCGAAG

Length

32 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A1|U|1884
6GZX|1|A1|C|1885
6GZX|1|A1|A|1886
6GZX|1|A1|A|1887
6GZX|1|A1|G|1888
6GZX|1|A1|G|1889
6GZX|1|A1|G|1890
6GZX|1|A1|G|1891
6GZX|1|A1|A|1892
6GZX|1|A1|G|1893
6GZX|1|A1|G|1894
6GZX|1|A1|G|1895
6GZX|1|A1|G|1896
6GZX|1|A1|U|1897
6GZX|1|A1|G|1898
6GZX|1|A1|C|1899
6GZX|1|A1|A|1900
6GZX|1|A1|A|1901
6GZX|1|A1|G|1902
6GZX|1|A1|C|1903
6GZX|1|A1|C|1904
6GZX|1|A1|C|1905
6GZX|1|A1|C|1906
6GZX|1|A1|G|1907
6GZX|1|A1|A|1908
6GZX|1|A1|A|1909
6GZX|1|A1|C|1910
6GZX|1|A1|C|1911
6GZX|1|A1|G|1912
6GZX|1|A1|A|1913
6GZX|1|A1|A|1914
6GZX|1|A1|G|1915

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain C1

50S ribosomal protein L2

Chain W1

50S ribosomal protein L28