HL_6GZX_055

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CCGAGCGUCCACAGCGGCG

Length

19 nucleotides

Bulged bases

6GZX|1|A1|U|2487, 6GZX|1|A1|C|2488

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A1|C|2480
6GZX|1|A1|C|2481
6GZX|1|A1|G|2482
6GZX|1|A1|A|2483
6GZX|1|A1|G|2484
6GZX|1|A1|C|2485
6GZX|1|A1|G|2486
6GZX|1|A1|U|2487
6GZX|1|A1|C|2488
6GZX|1|A1|C|2489
6GZX|1|A1|A|2490
6GZX|1|A1|C|2491
6GZX|1|A1|A|2492
6GZX|1|A1|G|2493
6GZX|1|A1|C|2494
6GZX|1|A1|G|2495
6GZX|1|A1|G|2496
6GZX|1|A1|C|2497
6GZX|1|A1|G|2498

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain L1

50S ribosomal protein L16

Chain e1

50S ribosomal protein L36