HL_6GZX_070

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GGGAACUGAAACAUCUCAGUACC

Length

23 nucleotides

Bulged bases

6GZX|1|A2|A|186

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A2|G|177
6GZX|1|A2|G|178
6GZX|1|A2|G|179
6GZX|1|A2|A|180
6GZX|1|A2|A|181
6GZX|1|A2|C|182
6GZX|1|A2|U|183
6GZX|1|A2|G|184
6GZX|1|A2|A|185
6GZX|1|A2|A|186
6GZX|1|A2|A|187
6GZX|1|A2|C|188
6GZX|1|A2|A|189
6GZX|1|A2|U|190
6GZX|1|A2|C|191
6GZX|1|A2|U|192
6GZX|1|A2|C|193
6GZX|1|A2|A|194
6GZX|1|A2|G|195
6GZX|1|A2|U|196
6GZX|1|A2|A|197
6GZX|1|A2|C|198
6GZX|1|A2|C|199

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain K2

50S ribosomal protein L15

Chain W2

50S ribosomal protein L28

Chain c2

50S ribosomal protein L34