HL_6GZX_085
3D structure
- PDB id
- 6GZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (ice)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.57 Å
Loop
- Sequence
- GGUGAGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GZX_085 not in the Motif Atlas
- Homologous match to HL_5J7L_154
- Geometric discrepancy: 0.2199
- The information below is about HL_5J7L_154
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_81538.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
6GZX|1|A2|G|761
6GZX|1|A2|G|762
6GZX|1|A2|U|763
6GZX|1|A2|G|764
6GZX|1|A2|A|765
6GZX|1|A2|G|766
6GZX|1|A2|A|767
6GZX|1|A2|C|768
Current chains
- Chain A2
- 23S ribosomal RNA
Nearby chains
- Chain A4
- Small subunit ribosomal RNA; SSU rRNA
- Chain C2
- 50S ribosomal protein L2
- Chain O4
- 30S ribosomal protein S15
- Chain Q4
- 30S ribosomal protein S17
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